CDS

Accession Number TCMCG066C16642
gbkey CDS
Protein Id XP_034592026.1
Location join(34305728..34305974,34306544..34306959,34306961..34307308,34307426..34307502,34307605..34307695,34308346..34308603,34308742..34308918,34309127..34309357)
Gene LOC117853852
GeneID 117853852
Organism Setaria viridis

Protein

Length 614aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034736135.1
Definition LOW QUALITY PROTEIN: polyadenylate-binding protein 5-like [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category A
Description Binds the poly(A) tail of mRNA
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13126        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
ko03018        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000288        [VIEW IN EMBL-EBI]
GO:0000289        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008143        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060211        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070717        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1900151        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACGCCGCCTCCGGCTACGATCGCGGCAGAAGCGGTCCCCGCGGCCGAGGGGGCACCGGCGGCAACACCTGCATCAATCGCGTCTTTGTACGTCGGCGATCTAGCTGATAGTGTCGAGGAGCCGGTGCTCATCGAGGTCTTCAGCCAGGATGCGCCCGTGGCGACCGTGCGTGTCTGCCGGGACAGCGTTAGCGGCGCCTCGCTCGGCTACGGCTACGTCAATTTCCACTCGCGTCATGACGTTGTTCGTGCACTTGAAGCTTTGAATTTTGCTCCTTTGAATGGAAAAAACATTAGGCTTATGTTCTCCAATAGGGATCCAAGTATGCGGAAAAGTGGACGTGCTAATGTGTTTGTTAAGAATCTTGAACCTAGCATTGACAGCAAGAGTTTGCATGACATGTTTTCATCTTTTGGCACTATACTATCATGCAAAGTTGCCACTGATCCATCCACTGGCCAGTCGAAAGGATACGGTTTTGTGCAGTATGAGAGTGAGGAGTCCACTCAAGATGCAATTAATAAGCTTAATGGCATGCTAGTAGATGGGAGAAAAATCTTTGTGGGCCTACACATGCGCCGTCAGAACAGAGAAGTCAAGTTCACAAATCTATATATAAAGAACTTGCCTGCTGAATTCACCGATGATGATCTGCGGCAAGAGTTTGCACCATTTGGTGAAATTACTAGTGTTGTGATCATGAGACATTCTGATGGTTCCTCCAGATGTTTTGGTTTTGTAAATTTTTAGAAATCAGAATATGTTACCGAAGCACTCCAAAAGTTGAATGACAAGTCTATAGATGATAAGGTCTTGTATGTTGGAAGGGCTCAGAAAAAAGCAGAAAGACAAGCTGAGTTGAGAGCAAAATTTCAGCAAGAAAGAGACAGTAAGGTTGAGAAACCTCAAGGGACTAATTTGTACTTGAAGAATCTTGATGATAGTATCAATGATGAGAAGCTCAAGAAGTTGTTCGAAGAATTTGGTGAGATAACATCATGCAAGGTCATGGTTGATTCTAGAGGAAGGAGCAAGGGTTCAGGTTTTGTGTCGTTTACCATTGCTGAAGCTGGCCATAATGCGATTAATGGAATGAACAGTAAGATAGTTGGAAAGAAACCACTCTATATTGGTTTACATCAACCTAAAGACCAAAGAAAAGCGATGTTAACTGCACATTTTGCTCAACGTAGCCTAGCAATGGCAGCTGTTTCGTACGCTACACTCCAGCCGGTTTATTTTGGCCACCCAGCTCCTGGTCAAATAACACTGCAAGCTACTGTCTTTGGATTTCCACAACACTTGGTCCCTAGAATGGGGCCTATCACTCAAGTCATAATGCCACAGAATACGCAGAGTTCAATGCGTCATGGCCAAAGGATGGGTGCTCGTCATGGAGCAACGTCACCACACATGTGTCTACAACAGCAGAGGATGATCCATCCAAATGCTAGTCAGGGCATCAGGTACATGCCCAATGCCAGGAACGCGGCTTACCCTGCAATGCTGCCTCAGGGCTTCCCAAGCGCCATGCCATCTCCGCAACAGGCGGATGGCAGCAGCCTTACTAGTGTTCTAGCTTCTGCTAGTCCGGAAGTGCAACAGCAGATGTTGGGCAACAAGCTGTACCCGTTGGTGGAACAGATCGAGCCTGTCCAAACCGGCAAGGTGACAGGGATGCTGCTCGAGATGGACAAGTTGGAGATCCTACACCTCCTGGAGTCTCCGGAGGCTCTCAGGGCCAAACTCCGTGAAGCCGTTGTGGTTCTGCAGCGATCTGAAGCCAGAGGCTCTGCCGATCCTGCGGGTGCAGTTGCGGCGCCAACTATGGATGCATGA
Protein:  
MATPPPATIAAEAVPAAEGAPAATPASIASLYVGDLADSVEEPVLIEVFSQDAPVATVRVCRDSVSGASLGYGYVNFHSRHDVVRALEALNFAPLNGKNIRLMFSNRDPSMRKSGRANVFVKNLEPSIDSKSLHDMFSSFGTILSCKVATDPSTGQSKGYGFVQYESEESTQDAINKLNGMLVDGRKIFVGLHMRRQNREVKFTNLYIKNLPAEFTDDDLRQEFAPFGEITSVVIMRHSDGSSRCFGFVNFXKSEYVTEALQKLNDKSIDDKVLYVGRAQKKAERQAELRAKFQQERDSKVEKPQGTNLYLKNLDDSINDEKLKKLFEEFGEITSCKVMVDSRGRSKGSGFVSFTIAEAGHNAINGMNSKIVGKKPLYIGLHQPKDQRKAMLTAHFAQRSLAMAAVSYATLQPVYFGHPAPGQITLQATVFGFPQHLVPRMGPITQVIMPQNTQSSMRHGQRMGARHGATSPHMCLQQQRMIHPNASQGIRYMPNARNAAYPAMLPQGFPSAMPSPQQADGSSLTSVLASASPEVQQQMLGNKLYPLVEQIEPVQTGKVTGMLLEMDKLEILHLLESPEALRAKLREAVVVLQRSEARGSADPAGAVAAPTMDA